From 7edc36cf8d91a56c43d4625b79ba8f8e6429a17f Mon Sep 17 00:00:00 2001 From: Padraig Gleeson Date: Mon, 23 Feb 2026 12:18:49 +0000 Subject: [PATCH 1/4] Update Python version in CI workflow to 3.12 --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index cbf236a..a9d4a41 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -14,7 +14,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: [ "3.10" , "3.11" ] + python-version: [ "3.10" , "3.12" ] steps: - uses: actions/checkout@v4 From cc4e1a17be2bdb92d1b203b8b78e0386ac05ab28 Mon Sep 17 00:00:00 2001 From: Padraig Gleeson Date: Mon, 23 Feb 2026 12:26:30 +0000 Subject: [PATCH 2/4] Install setuptools --- .github/workflows/ci.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index a9d4a41..a97b545 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -26,6 +26,7 @@ jobs: - name: Install packages run: | + pip install setuptools --upgrade # needed for Python 3.12 pip install seaborn numpy pip install pynwb==2.2.0 imageio pyabf pip install nbmake # nbmake installs pytest From a36a93224cb05e568e440b53434c991c32fcf277 Mon Sep 17 00:00:00 2001 From: Padraig Gleeson Date: Fri, 20 Mar 2026 12:18:10 +0000 Subject: [PATCH 3/4] Update ci.yml --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index a97b545..b208e43 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -26,7 +26,7 @@ jobs: - name: Install packages run: | - pip install setuptools --upgrade # needed for Python 3.12 + pip install setuptools==80 # needed for Python 3.12 pip install seaborn numpy pip install pynwb==2.2.0 imageio pyabf pip install nbmake # nbmake installs pytest From 1a0c1d060e43ee13ac11407bbfc9dd454b807d4b Mon Sep 17 00:00:00 2001 From: Padraig Gleeson Date: Fri, 20 Mar 2026 12:27:17 +0000 Subject: [PATCH 4/4] Update CI workflow to include Python 3.11; remove pin on pynwb --- .github/workflows/ci.yml | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index b208e43..ec57365 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -14,13 +14,13 @@ jobs: strategy: fail-fast: false matrix: - python-version: [ "3.10" , "3.12" ] + python-version: [ "3.10" , "3.11", "3.12" ] steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v6 - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@v5 + uses: actions/setup-python@v6 with: python-version: ${{ matrix.python-version }} @@ -28,7 +28,7 @@ jobs: run: | pip install setuptools==80 # needed for Python 3.12 pip install seaborn numpy - pip install pynwb==2.2.0 imageio pyabf + pip install pynwb imageio pyabf pip install nbmake # nbmake installs pytest - name: Print info