{2026.06}[2026.1,riscv] SciPy-bundle by julianmorillo · Pull Request #1734 · EESSI/software-layer

julianmorillo · 2026-09-30T14:42:21Z

No description provided.

julianmorillo · 2026-09-30T14:42:36Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-09-30T14:42:47Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.09/pr_1734/327121

date	job status	comment
Sep 30 14:42:45 UTC 2026	submitted	job id `327121` awaits release by job manager
Sep 30 14:42:57 UTC 2026	released	job awaits launch by Slurm scheduler
Sep 30 14:55:42 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-327121.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts Details No artefacts were created or found.
Sep 30 14:55:42 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason Failed for unknown reason Details ✅ job output file `slurm-327121.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-01T09:36:06Z

Failed due to disk space issue that should be solved. Launching again...

julianmorillo · 2026-10-01T09:36:19Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-01T09:36:29Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/327183

date	job status	comment
Oct 01 09:36:27 UTC 2026	submitted	job id `327183` awaits release by job manager
Oct 01 09:37:10 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 01 09:38:16 UTC 2026	running	job `327183` is running
Oct 01 11:21:41 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-327183.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17908532860.tar.zst` size: 0 MiB (76673 bytes) entries: 29 modules under 2026.06/software/linux/riscv64/generic/modules/all `gfbf/2026.1.lua` software under 2026.06/software/linux/riscv64/generic/software `gfbf/2026.1` reprod directories under 2026.06/software/linux/riscv64/generic/reprod `gfbf/2026.1/20261001_094226UTC` other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 01 11:21:41 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-327183.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2026-10-01T09:40:28Z

For SciPy-bundle you'll likely run into #1585 (comment). I've opened an issue here: numpy/numpy#32376.

Added options for SciPy-bundle with from-commit reference.

julianmorillo · 2026-10-08T08:51:39Z

I have upgraded numpy version in the easyconfig. Trying again...

julianmorillo · 2026-10-08T08:51:54Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-08T08:52:05Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328232

date	job status	comment
Oct 08 08:52:03 UTC 2026	submitted	job id `328232` awaits release by job manager
Oct 08 08:52:45 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 08 08:53:55 UTC 2026	running	job `328232` is running
Oct 08 09:00:30 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328232.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17914498290.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 08 09:00:30 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328232.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-08T09:01:19Z

There was a format error in the easystack

julianmorillo · 2026-10-08T09:01:24Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-08T09:01:33Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328236

date	job status	comment
Oct 08 09:01:31 UTC 2026	submitted	job id `328236` awaits release by job manager
Oct 08 09:01:36 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 08 09:02:43 UTC 2026	running	job `328236` is running
Oct 08 09:23:15 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328236.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17914510710.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 08 09:23:15 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328236.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-08T09:33:37Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-08T09:33:48Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328237

date	job status	comment
Oct 08 09:33:46 UTC 2026	submitted	job id `328237` awaits release by job manager
Oct 08 09:34:45 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 08 09:35:52 UTC 2026	running	job `328237` is running
Oct 08 10:44:35 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328237.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17914557970.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 08 10:44:35 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328237.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

Removed options for SciPy-bundle in YAML configuration.

julianmorillo · 2026-10-08T15:21:54Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-08T15:22:04Z

error: easystacks/software.eessi.io/2026.06/additional_arch/riscv64/generic/eessi-2026.06-eb-5.4.0-2026.1.yml: patch does not apply

Unable to download or merge changes between the source branch and the destination branch.
Tip: This can usually be resolved by syncing your branch and resolving any merge conflicts.

julianmorillo · 2026-10-09T09:32:13Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-09T09:32:22Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328430

date	job status	comment
Oct 09 09:32:20 UTC 2026	submitted	job id `328430` awaits release by job manager
Oct 09 09:32:41 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 09 09:33:45 UTC 2026	running	job `328430` is running
Oct 09 11:25:10 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328430.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17915446910.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 09 11:25:10 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328430.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-13T09:55:47Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-13T09:55:57Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328706

date	job status	comment
Oct 13 09:55:55 UTC 2026	submitted	job id `328706` awaits release by job manager
Oct 13 09:56:21 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 13 09:57:25 UTC 2026	running	job `328706` is running
Oct 13 10:19:13 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328706.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17918865030.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 13 10:19:13 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328706.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-13T10:36:34Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-13T10:36:46Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328723

date	job status	comment
Oct 13 10:36:44 UTC 2026	submitted	job id `328723` awaits release by job manager
Oct 13 10:37:20 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 13 10:38:24 UTC 2026	running	job `328723` is running
Oct 13 18:17:33 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328723.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17919147810.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 13 18:17:33 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328723.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-14T11:42:34Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-14T11:42:51Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328916

date	job status	comment
Oct 14 11:42:49 UTC 2026	submitted	job id `328916` awaits release by job manager
Oct 14 11:43:30 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 14 11:44:38 UTC 2026	running	job `328916` is running
Oct 14 14:45:49 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-328916.out` ❌ found message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17919888090.tar.zst` size: 0 MiB (22 bytes) entries: 0 modules under 2026.06/software/linux/riscv64/generic/modules/all no module files in tarball software under 2026.06/software/linux/riscv64/generic/software no software packages in tarball reprod directories under 2026.06/software/linux/riscv64/generic/reprod no reprod directories in tarball other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 14 14:45:49 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328916.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

julianmorillo · 2026-10-14T15:18:30Z

Disk space problem, Trying again after cleaning up.

julianmorillo · 2026-10-14T15:19:19Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-14T15:19:32Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/328956

date	job status	comment
Oct 14 15:19:29 UTC 2026	submitted	job id `328956` awaits release by job manager
Oct 14 15:19:56 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 14 15:21:00 UTC 2026	running	job `328956` is running
Oct 15 00:28:55 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-328956.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2026.06-software-linux-riscv64-generic-17920236860.tar.zst` size: 155 MiB (163308913 bytes) entries: 12590 modules under 2026.06/software/linux/riscv64/generic/modules/all `SciPy-bundle/2026.05-gfbf-2026.1.lua` software under 2026.06/software/linux/riscv64/generic/software `SciPy-bundle/2026.05-gfbf-2026.1` reprod directories under 2026.06/software/linux/riscv64/generic/reprod `SciPy-bundle/2026.05-gfbf-2026.1/20261015_000916UTC` other under 2026.06/software/linux/riscv64/generic no other files in tarball
Oct 15 00:28:55 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-328956.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

…where

ocaisa · 2026-10-15T18:42:50Z

bot: build repo:eessi.io-2026.06-software instance:eessi-bot-riscv-prod for:arch=riscv64/generic

riscv-eessi-io-bot · 2026-10-15T18:43:00Z

New job on instance eessi-bot-riscv-prod for repository eessi.io-2026.06-software
Building on: generic
Building for: riscv64/generic
Job dir: /home/eessibot/production/shared/jobs/2026.10/pr_1734/329092

date	job status	comment
Oct 15 18:42:58 UTC 2026	submitted	job id `329092` awaits release by job manager
Oct 15 18:43:39 UTC 2026	released	job awaits launch by Slurm scheduler
Oct 15 18:44:43 UTC 2026	running	job `329092` is running

{2026.06}[2026.1,riscv] SciPy-bundle, Szip, UCX

3b12b02

Neves-P added riscv 2026.06-software.eessi.io labels Sep 30, 2026

Merge branch 'main' into SciPy-bundle

89a7502

julianmorillo added 4 commits October 2, 2026 13:23

Merge branch 'main' into SciPy-bundle

6af80d0

Merge branch 'main' into SciPy-bundle

60c97d3

Merge branch 'main' into SciPy-bundle

00d5db9

Update SciPy-bundle entry in YAML configuration

9cf7305

Added options for SciPy-bundle with from-commit reference.

Fix indentation in YAML file for SciPy-bundle

dd30e85

Update from-commit hash for SciPy-bundle

62b222a

julianmorillo added 2 commits October 8, 2026 15:02

Merge branch 'main' into SciPy-bundle

88dcb63

Update YAML configuration for SciPy-bundle

f070fb0

Removed options for SciPy-bundle in YAML configuration.

julianmorillo added 2 commits October 8, 2026 17:22

Merge branch 'main' into SciPy-bundle

5658ec0

Merge branch 'main' into SciPy-bundle

607a0ba

julianmorillo added 4 commits October 9, 2026 11:40

Merge branch 'main' into SciPy-bundle

90f0316

Merge branch 'main' into SciPy-bundle

ec85c4e

Add options for SciPy-bundle in YAML config

9be76ef

Merge branch 'main' into SciPy-bundle

e38cd9d

Update commit reference for SciPy bundle

746bb26

Update from-commit hash for SciPy bundle

19ffb8a

julianmorillo mentioned this pull request Oct 15, 2026

{2026.06}[2026.1, riscv] PLUMED-2.10.0 #1726

Open

ocaisa mentioned this pull request Oct 15, 2026

Add compilation flag to numpy and patch to scipy to avoid test errors in RISC-V easybuilders/easybuild-easyconfigs#27146

Merged

Szip and UCX are not in the bundle so they must be in another PR some…

b409b73

…where

ocaisa changed the title ~~{2026.06}[2026.1,riscv] SciPy-bundle, Szip, UCX~~ {2026.06}[2026.1,riscv] SciPy-bundle Oct 15, 2026

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riscv-eessi-io-bot Bot commented Sep 30, 2026 •

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riscv-eessi-io-bot Bot commented Oct 15, 2026 •

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