1210 abm paper logger - #1507

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xsaschako wants to merge 39 commits into

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1210-abm-paper-logger

Commits on May 27, 2025

Add scripts for analyzing infection states and ICU data from simulation runs
xsaschako
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840303d
Remove unused imports and enable plotting functions in infection states script
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c7ffab3
Refactor infection states plotting script: enhance documentation, improve function structure, and add new plotting capabilities for location types.
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e986d96
Refactor plotAbmInfectionStates.py: update authorship, enhance module documentation, and improve function argument handling for better usability
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6e4c6fe
Add unit tests for plotAbmInfectionStates: implement comprehensive test cases for loading H5 results and plotting functions
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663a189
Refactor setup.py: enhance PylintCommand documentation and update comments for clarity
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28c3187
Fix comment in setup.py: update example for Excel file types in install_requires
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2ba672e
Remove plotAbmICUAndDeadComp.py: delete unused script for ICU and death comparison plots
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baa272b
formatting
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20b651e

Commits on May 28, 2025

Commits on Jun 14, 2025

Julias suggestions p1
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e4df6cb
julia review p2
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c5cf7dc

Commits on Jun 15, 2025

julia review pt3
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f5dffd6
Merge branch 'main' into 1290-add-abm-visualization-from-paper-to-memilio-plot
xsaschako
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f124f04
format
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75e1105
fix tests
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ddb9cb4

Commits on Jun 21, 2025

julia review pt5
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c2433fc
julia review pt7
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606ba7f
fix: improve error message for missing file in fake filesystem
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e316b6a

Commits on Jun 23, 2025

Commits on Mar 9, 2026

Merge branch '1210-abm-paper-logger' into 1290-add-abm-visualization-from-paper-to-memilio-plot
xsaschako
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cb08197
update
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7ccdb45
update example
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2132e8a
Merge branch '1290-add-abm-visualization-from-paper-to-memilio-plot' into 1210-abm-paper-logger
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0c5c13a
update
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0fdbb15
redo
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e22dd77
update
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7d544bf
fix comment formatting in plotAbmInfectionStates.py
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9724423
update
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22044c6
update
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6c6879f
update
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49d0587

Commits on Jul 31, 2026

Merge branch 'main' into 1210-abm-paper-logger
xsaschako
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8fc375a
update
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72fcfc5
delete comment
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d40ead4
format
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19b306e
fix test
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faf0f40