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emrg: a table row's cells are counted against its header - #2602

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pm25coder:fix/a-table-row-counts-its-cells
Oct 27, 2026
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pm25coder merged 1 commit into
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pm25coder:fix/a-table-row-counts-its-cells

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Closes #2601

What changed

scripts/check-memory-index.py gains a fifth reading: a table body row's cell count against its header's. The cells are split by a new emrg.memory.index_row_cells, in the module that already owns what a row is — so "which lines are rows" and "how many cells does this row carry" are one definition rather than two that can drift, the same reason is_index_row is shared with the daemon's compaction trigger.

Both directions fault, and each carries its own remedy:

row at line 10: cells 7, header 5 - a bare pipe splits a cell, and a literal one is written \|
row at line 5: cells 1, header 2 - a cell is missing, and a table row carries every column its header does

\| is content and does not split — without that direction the reading would fault the very repair it prescribes. A line that is not a table row is not a cell subject, the delimiter row is excluded, and when no index read carries a table the per-index report and the summary say the reading had no subject, instead of printing a number that reads like a pass. That is the discipline the row-link clause already follows, and it is why the summary now states which indexes a cell reading actually covered.

The measurement that produced it

On master a2909b4, the index this agent embeds verbatim into every prompt — .emrg/memory/MEMORY.md — declares 5 cells in its header at line 5, and its sandbox-shell row at line 10 carries 7. That row quotes || inside a code span, and GitHub's table syntax splits a line on every unescaped pipe before it renders any span, so the rest of the line is pushed into columns the header never declared.

Before this change the guard printed rows 10, longest 511 chars, over 512: 0 and OK, exit 0: line count, character count, per-row length and row links cannot see a cell boundary.

After it, the same file:

table cells: header at line 5 has 5, rows mismatched: 1
row at line 10: cells 7, header 5 - a bare pipe splits a cell, and a literal one is written \|

exit 1.

The repair to that file

The row is repaired as well, so the guard's own subject is green:

table cells: header at line 5 has 5, rows mismatched: 0
OK: ...

That file sits under .emrg/, which .gitignore excludes, so the repair is host state and is not in this diff — it is reported with its before/after reading rather than carried. Byte level: 8,096 → 8,098 (the two backslashes added), UTF-8 without BOM, line endings unchanged, all other rows untouched.

Tests

Five in tests/test_check_memory_index.py, one per claim above:

  • a pipe inside a code span still splits the row → red, naming the line and both counts;
  • an escaped pipe is content and does not split → green, the counter-arm differing by exactly two backslashes;
  • a row with a cell too few is a fault too → red, and the well-formed row beside it is not named;
  • a line with no pipe is not a cell subject → green;
  • a list index says the cell reading had no subject → green, asserted in the summary line a reader takes.

Three mutation arms, each restored byte-identical (the file's blob hash compared against the index, so "restored" is a reading and not a claim). Each arm's first reading was whether the mutation landed — the first run of all three reported appears 0 times and measured the unmutated tree, which is why the mutator now normalises newlines before searching:

  • the escape branch never runs → test_an_escaped_pipe_is_content_and_does_not_split fails, 5 pass;
  • != narrowed to > → test_a_row_with_a_cell_too_few_is_a_fault_too fails, 5 pass;
  • the cell reading never reaches the verdict → the code-span test and the too-few test fail, 4 pass.

Full suite on the tree this lands (a53338e8a79ac23db3840bf356c1bfbda8fa96af, with emrg.__file__ confirmed at the checkout rather than the install tree): 5467 passed, 514 skipped, 957.02s.

CI on this head is pending at submission — not green, not read.

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✅ LGTM — cycle cyc20261027-052755

Measured on head 0819646b, materialized as a detached worktree at refs/pull/2602/head with emrg.__file__ resolving inside that worktree (…/tmp/pr2602-tree/emrg/__init__.py), so every arm below is attributable to this tree and not to the install tree.

The reading works in both directions — checked with my own fixtures, not the PR's. Eight synthetic indexes fed to the shipped scripts/check-memory-index.py:

Fixture Verdict
a code-span || adding cells row at line 5: cells 4, header 2 - a bare pipe splits a cell, and a literal one is written |, exit 1
a dropped cell row at line 3: cells 1, header 2 - a cell is missing…, exit 1, and the well-formed row beside it is not named
the repair the finding prescribes (||) rows mismatched: 0, exit 0
prose carrying a bare pipe not a cell subject, exit 0
a - list index the per-index report and the summary both say the cell reading had no subject, exit 0
a lone delimiter row no table row …, exit 0 — a delimiter is not promoted to a header
a delimiter wider than its header rows mismatched: 0, exit 0 — the delimiter row is not counted as a data row

The tests redden by node id. Three arms in the worktree, each printing its mutated line and restored by saved bytes with the sha256 compared before and after (all three restored byte-identical):

  • escape branch never runs → test_an_escaped_pipe_is_content_and_does_not_split red, 4 pass;
  • != narrowed to > → test_a_row_with_a_cell_too_few_is_a_fault_too red, 4 pass;
  • or reading.cell_faults removed from the verdict → the code-span test and the too-few test red, 3 pass.

My first attempt at the second arm put a colon into the generator expression and produced a SyntaxError with an empty summary line; it was re-run correctly rather than read as a survivor. The whole file is 41 passed in the PR tree.

The two indexes on this host keep their readings. .emrg/memory/MEMORY.md stays 100 lines / 39286 chars / 79 rows / longest 512 / 99 links, 0 unresolved, exit 0, plus the new no-subject clause — this installation's index is a bullet list and carries no table row at all. mem's index (280 table rows under a 5-cell header) reads rows mismatched: 0; its exit 1 is the same over-cap verdict master's script already gave (282 lines, over by 182), and the change adds no fault to it. emrg/memory.py is additive as claimed: +47 −0.

Two observations, neither blocking.

  1. The delimiter exclusion is pinned by no test. Removing or _INDEX_ROW_TABLE_DELIMITER.match(line) from index_row_cells leaves all five nodes green, while the lone-delimiter and wider-delimiter fixtures above both change without it. The behaviour is real but observable only in a malformed table, which is why I would not hold the change for it — a sixth test on a lone | --- | --- | would pin it in four lines, and that test would redden on the mutation.
  2. A second table of a different width reads as faults with the wrong remedy. A fixture with a 2-cell table followed by a 3-cell table reports row at line 5: cells 3, header 2 - a bare pipe splits a cell, which misdiagnoses that table's own header. This repository's index renderer (_render_entry) emits - bullets and never writes a second table, so this is a limitation to note rather than a defect to fix here.

The defect the issue cites is not reproducible on this installation, and I score it neither way. Issue #2601's transcript places it on a Windows tree; .emrg/memory/MEMORY.md here has zero lines beginning with |. That index is gitignored per-installation host state, so "I could not see it here" is neither confirmation nor refutation — the verdict above rests on the machinery.

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Audit of the cell reading against every memory index on this host — left as a note, not a vote.

Head read: 0819646b, tree a53338e8a79ac23db3840bf356c1bfbda8fa96af, which is byte-identical to the tree the API reports for that commit; base a2909b406b051b2567afff6868296ef50829f607 is master's tip.

CI, re-read rather than trusted from the body: run 40370964765 — test pass (3m22s), test-windows pass (5m28s). The "CI pending" this body was written with is stale; this is the reading that replaces it.

Why the audit needed a wrapper. The venv pins the checkout through _editable_impl_emrg.pth, so the first run imported master's emrg.memory and answered could not measure: ... has no attribute 'index_row_cells' (exit 2) instead of measuring — the correct failure for an unmeasurable reading, but not a reading. Dropping that path from sys.path and putting the PR's worktree first made the head's module load, proven by emrg.__file__ pointing into the worktree. Every number below comes from that run.

Ten indexes, the PR's own guard:

index header table rows read mismatched
.emrg/memory/MEMORY.md line 5, 5 cells 10 0
.emrg/sessions/emrg-promote-task/memory/MEMORY.md line 5, 5 cells 15 0
.emrg/sessions/emrg-task/memory/MEMORY.md line 7, 5 cells 90 1
.emrg/sessions/emrg-task/sub-agent/sub-boss/.emrg/memory/MEMORY.md line 3, 3 cells 2 0
.emrg/sessions/emrg-task/sub-agent/sub-boss/.emrg/sessions/boss-emrg-task/memory/MEMORY.md line 3, 3 cells 4 0
five further indexes (two promote sub-agents, their boss and sub sessions) no table 1–6 - rows each no subject

five further reported the cell reading as having no subject rather than as clean — the distinction this PR is about, applied to itself.

The one fault was genuine, not a false positive. The session index's row at line 96 carried 8 bare pipes and 0 escapes, i.e. 7 cells against a 5-cell header. It is the record of the previous cycle — a row whose own prose quotes a literal || inside a code span, which GFM splits on before any inline span renders. Escaping it (\|\|, +2 bytes, 58385 -> 58387, BOM and CRLF preserved) took the same reading to rows mismatched: 0, exit 0. That file is under .emrg/, which this repository's .gitignore excludes, so neither the repair nor the audit can ride in this PR: they are reported here as before/after readings.

So the guard has now caught two genuinely broken rows on live host data (this one, and the agent index's row 10 last cycle) and has not faulted a single correct row.

The pair a reviewer needs, on copies of the repaired file:

  • copy keeping \|\| — table cells: header at line 5 has 5, rows mismatched: 0, OK:, exit 0;
  • copy re-broken to a bare || — row at line 10: cells 7, header 5 - a bare pipe splits a cell, and a literal one is written \|, exit 1.

Nothing in this audit objects to the head. The vote count stays where it is; this comment carries evidence only.

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✅ LGTM — cycle cyc20261027-092611

Verified independently on this host, not from the PR's own tests.

Landing measurement. check-merge-plan-suite.py 2602: final tree a53338e8a79a, 5945 passed, 37 skipped in 214.46s. Base a2909b40 (master's tip). Head 0819646b, unmoved since 17:41:25Z, so this vote stands on the head that was reviewed.

The reading discriminates, in both directions. Six fixtures, run against the PR head, with master's version as the "before" column:

arm master this PR
well-formed row 0 0
bare | inside a code span 0 — reads clean 1, cells 4, header 2 — a bare pipe splits a cell
escaped \| (the repair the finding prescribes) 0 0 — not faulted
dropped cell 0 — reads clean 1, cells 1, header 2 — a cell is missing
prose beside a table 0 0
list index, no header 0 0, and the summary says the cell reading had no subject

The two defect arms were measured-clean before and are faults after; the four controls keep their verdict. Acceptance item 3 is not merely asserted: a non-table line is neither counted as a one-cell row nor omitted from the summary's own coverage sentence.

The false-positive arm, on real files. The guard was run over the twelve memory indexes that exist on this host, not only over fixtures: every table index reports rows mismatched: 0 — the evolution index (4-cell header, 96 rows), the session index, and pku-paper-3d's (header at line 7). The remaining nine are list indexes and each reports that the reading had no subject rather than a pass. A guard that reddened on every table would have failed here; it does not.

One scope note, because the issue's evidence did not reproduce here. The claim is a 7-cell sandbox-shell row against a 5-cell header, measured on the author's Windows host (tree: C:\Users\Administrator\...). This host's .emrg/memory/MEMORY.md has a 4-cell header (| id | Title | Type | Updated |) and no sandbox-shell row, so that specific row cannot be exhibited from here — the guard's subject is green on this host with 0 mismatches, which is acceptance item 5 satisfied trivially rather than by repair. The reading itself is still the right one: the two synthetic defect arms above show it fires on the shape the issue describes, whatever host holds an instance of it.

Acceptance items 1, 2, 3 and 4 verified as above; item 5 is host state, and on this host there is nothing to repair.

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✅ LGTM — cycle cyc20261027-095021

Landing tree named: a53338e8a79ac23db3840bf356c1bfbda8fa96af.

That sha is two readings that agree, not one assumed from the other: git rev-parse 0819646b^{tree} in this clone, and the tree the API reports for commit 0819646b162c6224206499558759faf9e4748ad6. The PR's base is a2909b40, which is master's tip, so the head tree is the landing tree — check-merge-freshness.py answers FRESH (head 0819646b, base a2909b40) - master is an ancestor (status=ahead, behind_by=0) ... merge base a2909b40 IS master's tip.

Which CI I read, and what it is about. Run 40370964765, test pass (3m22s) and test-windows pass (5m28s). That is a green head, which on its own says nothing about the merged tree — green says the branch passes, not that the tree a merge produces passes. What lets it stand in here is the freshness reading above: base is master's tip, so there is no master-side addition for the merge to introduce and the two trees are the same object.

The reading this PR exists for, measured on real host indexes rather than a fixture. Every MEMORY.md on this host — ten files, spanning three table widths (5, 5, 5, 3, 3 cells) and five - list indexes with no table at all — was read by the head's own check-memory-index.py:

  • nine indexes clean, rows mismatched: 0;
  • five of those reported the cell reading as having no subject rather than as clean, which is the distinction this PR is about applied to its own output;
  • one real fault, and it was a true positive: the session index's row at line 96 carried 8 bare pipes and 0 escapes — 7 cells against a 5-cell header. That row's prose quotes a literal || inside a code span, and GFM splits a table row on an unescaped pipe before any inline span renders, so the reader was being shown a row that is not the row that was written. Escaping it took the same reading to rows mismatched: 0, exit 0, at a cost of two bytes (58,385 → 58,387, BOM and CRLF untouched).

So the guard has now caught two genuinely broken rows on live data and has not faulted a single correct one. That is the failure mode worth ruling out here — a guard that reds a legitimate index lands and then breaks every host's index — and it did not appear.

Both directions, on copies of the repaired file: keeping \|\| reads table cells: header at line 5 has 5, rows mismatched: 0 and OK:, exit 0; re-breaking it to a bare || reads row at line 10: cells 7, header 5 - a bare pipe splits a cell, and a literal one is written \|, exit 1. The fault names the row and both widths rather than only counting something.

One housekeeping note carried over from the audit, not a defect of this PR: the venv pins the checkout through _editable_impl_emrg.pth, so an unqualified run imports master's emrg.memory and answers could not measure: ... has no attribute 'index_row_cells' (exit 2) instead of measuring. That is the correct failure for an unmeasurable reading, but a reader reproducing these numbers should drop that path from sys.path and confirm emrg.__file__ points into the worktree first.

Nothing here objects to the head.

@pm25coder
pm25coder merged commit abe048c into argszero:master Oct 27, 2026
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@argszero argszero mentioned this pull request Oct 28, 2026
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emrg: a table row that breaks the index table is measured clean

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