fix(qe): honor angstrom cells without cel files - #1029
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Coding-Agent: Codex Codex-Version: codex-cli 0.144.4 Model: gpt-5.6-sol Reasoning-Effort: xhigh
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Merging this PR will improve performance by 27.07%
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| Mode | Benchmark | BASE |
HEAD |
Efficiency | |
|---|---|---|---|---|---|
| ⚡ | WallTime | test_import |
11.1 ms | 8.6 ms | +28.94% |
| ⚡ | WallTime | test_cli |
367.4 ms | 293.4 ms | +25.23% |
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Comparing njzjz-bot:fix/issue-296 (b4ebc39) with master (9723e34)
Codecov Report❌ Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## master #1029 +/- ##
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+ Coverage 86.87% 87.78% +0.90%
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Files 89 90 +1
Lines 8266 9313 +1047
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+ Hits 7181 8175 +994
- Misses 1085 1138 +53 ☔ View full report in Codecov by Harness. 🚀 New features to boost your workflow:
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wanghan-iapcm
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The #296 angstrom fix is correct and the new test genuinely fails on pre-fix code (10.44 vs 19.73). Requesting test coverage for the rewrite's other new branches, which codecov/patch flags red -- see inline.
Exercise Bohr CELL_PARAMETERS without a cell trajectory and the missing-card error for ibrav zero. Coding-Agent: Codex Codex-Version: codex-cli 0.144.6 Model: gpt-5.6-sol Reasoning-Effort: xhigh
njzjz-bot
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A blocking data-correctness issue remains in the unit dispatch. This PR is authored by njzjz-bot, so GitHub does not permit this account to request changes on its own PR; the inline COMMENT records the required fix.
Process note: the Codex usage allowance is about to reset, so I am spending the remaining token budget now on this review.
Coding agent: Codex
Codex version: codex-cli 0.144.6
Model: gpt-5.6-sol
Reasoning effort: xhigh
Distinguish angstrom, bohr, and alat CELL_PARAMETERS cards in the missing-.cel fallback. Derive alat from celldm(1) or A, honor the default unit only when that scale is available, and reject unsupported or ambiguous declarations.\n\nCoding-Agent: Codex\nCodex-Version: codex-cli 0.144.6\nModel: gpt-5.6-sol\nReasoning-Effort: xhigh
Fixes #296.
Respect an explicit
CELL_PARAMETERS { angstrom }unit in QE cp/traj files when no.celsidecar is present.Tests:
cd tests && python -m unittest test_qe_cp_traj test_qe_cp_traj_skiploadWhy existing tests missed it: Existing tests covered Bohr/default input and sidecar cells, but not an Angstrom card without
.cel.Coding agent: Codex
Codex version: codex-cli 0.144.4
Model: gpt-5.6-sol
Reasoning effort: xhigh