scan-repository: include vulnerabilities in scan output

[amarkdotdev]

Fixes #1414

scan-repository was creating a ResultContext with IncludeVulnerabilities=false. When watches are configured, that hid JAS vulnerability tables (including SAST) even though the scan found issues.

Test plan

• go test ./utils/issues/... ./utils/outputwriter/... -count=1 (pass)
• scanrepository tests require JF_URL; change is a one-line context flag fix aligned with scan-pull-request behavior

Summary by CodeRabbit

• Bug Fixes
  • Scan repository results now use the correct results context configuration, improving how scan outcomes are handled and displayed.

[coderabbitai]

No actionable comments were generated in the recent review. 🎉

ℹ️ Recent review info

⚙️ Run configuration

Configuration used: Organization UI

Review profile: CHILL

Plan: Team

Run ID: c1084798-2563-47ad-9c0e-1f2817d453fc

📥 Commits

Reviewing files that changed from the base of the PR and between f1b6baa and 6dd9dbe.

📒 Files selected for processing (1)

• scanrepository/scanrepository.go

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📝 Walkthrough

Walkthrough

The scan repository command now enables the results context during prerequisite setup.

Changes

Scan repository results

Layer / File(s)	Summary
Enable scan results context scanrepository/scanrepository.go	setCommandPrerequisites now passes true to SetResultsContext. This changes the results context configuration for scan repository operations.

Estimated code review effort: 1 (Trivial) | ~2 minutes

Merge Risk: ⚪ Minimal · up to 6dd9d

Scan repository output will include detected vulnerabilities, including SAST results, with no identified merge-blocking risk.

Suggested reviewers: attiasas, eranturgeman, orto17

🚥 Pre-merge checks | ✅ 5

✅ Passed checks (5 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title check	✅ Passed	The title clearly identifies the primary change: including vulnerabilities in scan-repository output.
Linked Issues check	✅ Passed	The change sets the results context to include vulnerabilities, which directly addresses issue #1414 and enables SAST results in scan output.
Out of Scope Changes check	✅ Passed	The pull request contains one focused configuration change related to vulnerability output. No unrelated changes are present.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check. Docstring coverage is scoped to functions touched by this diff. Analyzed 0 functions across 1…

✨ Finishing Touches

🧪 Generate unit tests (beta)

• Create PR with unit tests

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