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4 changes: 2 additions & 2 deletions DESCRIPTION
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@@ -1,8 +1,8 @@
Package: projpred
Encoding: UTF-8
Title: Projection Predictive Feature Selection
Version: 2.10.0.9000
Date: 2025-12-05
Version: 2.11.0
Date: 2026-09-30
Authors@R: c(person("Juho", "Piironen", role = c("aut"),
email = "juho.t.piironen@gmail.com"),
person("Markus", "Paasiniemi", role = "aut"),
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18 changes: 13 additions & 5 deletions NEWS.md
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If you read this from a place other than <https://mc-stan.org/projpred/news/index.html>, please consider switching to that website since it features better formatting and cross-linking.

# profpred 2.10.1.9000
# projpred 2.11.0

## Major changes

## Minor changes

* Added `proj_epred()`, which is essentially a wrapper around `proj_linpred()` with `transform = TRUE`. (GitHub: #559, #560)

## Bug fixes

* Fixed bug in `cv_varsel()` with `cv_method = "kfold"`: Submodels were incorrectly scored with the full data from the reference model family instead of the correct fold's one, which matters for the latent projection. (GitHub: #567)

## Bug fixes and maintenance

* Fixed bug in `cv_varsel()` with `cv_method = "kfold"`: Submodels were incorrectly scored with the full data from the reference model family instead of the correct fold's one, which matters for the latent projection. (GitHub: #567, #568)
* Tests: Adapt to version 0.9.15 of package mclogit (GitHub: #552)
* Docs: Fix links to `summary()` generic (GitHub: #553)
* Tests: Adapt tests to testthat v3.3.0 (GitHub: #554)
* Use relative fontsize for model size numbers (GitHub: #555,#556)
* Remove seemingly outdated lme4 note (GitHub: #558)
* Add AI contribution policy (GitHub: #561)
* Minor maintenance updates (GitHub: #562)
* Tests: Resolve CI failures (GitHub: #569)
* Docs:Inherit navbar from template (GitHub: #570)

# projpred 2.10.0

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61 changes: 25 additions & 36 deletions cran-comments.md
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* Local:
+ R version 4.5.1 (2025-06-13) on Ubuntu 24.04.3 LTS system (platform:
x86_64-pc-linux-gnu (64-bit))
* win-builder:
+ R-devel R Under development (unstable) (2025-12-04 r89100 ucrt)
+ R-release (R version 4.5.2 (2025-10-31 ucrt))
+ R-oldrelease (version 4.4.3 (2025-02-28 ucrt))

* win-builder:
+ R-devel R Under development (unstable) (2026-09-29 r90598 ucrt)
+ R-release (R version 4.5.3 (2026-03-11 ucrt))
+ R-oldrelease (R version 4.5.3 (2026-03-11 ucrt))

## R CMD check results

All checks gave neither ERRORs nor WARNINGs.

### Local check

The local check on a Linux system gave the following NOTEs:
The local check on a Linux system gave the following NOTE:

Suggests or Enhances not in mainstream repositories:
cmdstanr
Availability using Additional_repositories specification:
cmdstanr yes https://stan-dev.r-universe.dev/

As stated in the first NOTE, the 'cmdstanr' package
(<https://mc-stan.org/cmdstanr/>) is not available on CRAN. The 'cmdstanr'
backend can be used in 'projpred''s unit tests, but it is not necessary for
'projpred' to work. As this NOTE says, we have added the repository URL for the
'cmdstanr' package to the 'DESCRIPTION' file (field 'Additional_repositories').

The 'cmdstanr' package (<https://mc-stan.org/cmdstanr/>) is not available on CRAN.
The 'cmdstanr' backend can be used in 'projpred''s unit tests, but it is not necessary
for 'projpred' to work. The repository URL for 'cmdstanr' is specified in the 'DESCRIPTION'
file (field 'Additional_repositories').

### win-builder checks

#### R-devel

The R-devel check on win-builder gave the following NOTE:

Suggests or Enhances not in mainstream repositories:
cmdstanr
Availability using Additional_repositories specification:
cmdstanr yes https://stan-dev.r-universe.dev/

For an explanation of this NOTE, see the explanations for the local check above.
The R-devel check on win-builder gave the same NOTE regarding 'cmdstanr' as the
local check.

#### R-release

The R-release check on win-builder gave the following NOTEs:

Suggests or Enhances not in mainstream repositories:
cmdstanr
Availability using Additional_repositories specification:
cmdstanr yes https://stan-dev.r-universe.dev/

For an explanation of this NOTE, see the explanations for the local check above.
The R-release check on win-builder gave the same NOTE regarding 'cmdstanr' as the
local check.

#### R-oldrelease

The R-oldrelease check on win-builder gave the following NOTEs:


Suggests or Enhances not in mainstream repositories:
cmdstanr
Availability using Additional_repositories specification:
Expand All @@ -65,13 +51,16 @@ The R-oldrelease check on win-builder gave the following NOTEs:
* checking package dependencies ... NOTE
Packages suggested but not available for checking: 'unix', 'cmdstanr'

For an explanation of the first NOTE, see the explanations for the local check
above. The unavailability of some "suggested" dependencies mentioned in the
second NOTE is not due to 'projpred'.
Possibly misspelled words in DESCRIPTION:
Paasiniemi
Piironen
Vehtari
rkner

The 'cmdstanr' NOTE is explained above. The unavailability of the suggested
dependencies is not due to 'projpred'. The possible misspellings are proper names
in the package DESCRIPTION and references and are not spelling errors.

## Downstream dependencies

There are two downstream dependencies for this package: 'BayesERtools' and
'brms'. Both of these have been checked locally (with the 'projpred' version
submitted here), at their current CRAN versions and at their most recent
development versions.
There are two downstream dependencies for this package: 'BayesERtools' and 'brms'. Both of these have been checked locally (with the 'projpred' version submitted here), at their current CRAN versions and at their most recent development versions.
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